miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|147892822|gb|ES549956.1|ES549956 ATTTNNNNNNNGAGTAAAGCAGGCGGGGNCCGGGNTCCGGNAATTCCCGGGATATCGTCGAACCCACGCGNTCCGATCCC
AAGCCCCTATTTCGAGATTTTAGGCACTGTTTTTAGCCCTTCTAGTTGCAATAATTTTCTATTACCACCACGCCTTCCAG
TTCTGGGCCAGAAAAAACATCCCTTTTATCCCTCCACGCTTTCCACTCGGCAACACCAATGTAGTTCTACCACGAGGATT
AACAATCGGATTACTTAGCAAGACTTTTTACGACTATTTCAAGCAACGTGGCCATAAAATCGGTGGTGTTTTCCTAGTGA
CTGAACCAAACCTCATGATTTTGGACCCCGACTACATCAAGAATATCCTTTTGAAAGACTTTCACCATTTTGTAGATCGA
GGGTTTTACTTCAATGAGAAAACTGACCCAATCAGCGCCAATTTGTTCACAATTGATGGCGATCAGTGGAGAAATCTCCG
AACTAAACTCACCCCAACTTTCACCTCAAGTAAAATGAAAATCATGTTCCAAACCGTGAAAAACTGCTGCAACAACATGC
TTGAAGCTATTGCAAGTAACACTGACCTGGACAAAGATTTGAAGGAGTTTCTGGGACGTTACACTGTTGATGTTGTTGGG
TCTTGTGCTTTTGGTATTGAGTGTAATAGTTTCAAGCACCCAGATGCCGAATTTCGAAAAATGGGTCTTAGGGCGTTTTC
ACTTTAGTTTTTTTGAGATCAATTCGGGGCTTTTTTTATTGCTTATTTGCCCAAATTGTCGCGCCNAATGGGCCTTCCAA
GCAACAATAAANGACATTAGGGGAGTTTTTTCTACAANGTNGTGATGGAGACAATACAGNAAACGGGAGGGAAACNCAAA
TCAAACNGTAATGGATTTTTTACAAAAT




Most similar to sp|P82711|C6A19_DROME

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P82711|C6A19_DROME Probable cytochrome P450 6a19 OS=Drosophila
           melanogaster GN=Cyp6a19 PE=1 SV=1
          Length = 503

 Score =  169 bits (428), Expect = 2e-41
 Identities = 93/241 (38%), Positives = 136/241 (56%), Gaps = 7/241 (2%)
 Frame = +2

Query: 155 FQFWARKNIPFIPPRFPLGNTNVVLPRGLTIGLLSKTFYDYFKQRGHKIGGVFLVTEPNL 334
           + +W R+ IP  PP  PLGNT  +       G+L +T+  + KQ      G +L     +
Sbjct: 23  YTYWKRRGIPHDPPNIPLGNTGELWRTMPLAGILKRTYLKFRKQTDGPFAGFYLYAMKYI 82

Query: 335 MILDPDYIKNILLKDFHHFVDRGFYFNEKTDPISANLFTIDGDQWRNLRTKLTPTFTSSK 514
           +I D D++K +L++DF  F DRG Y NEK DP++ NL TI+G +W+NLR KLT TFTS+K
Sbjct: 83  VITDVDFVKTVLIRDFDKFHDRGVYHNEKDDPLTNNLATIEGQKWKNLRQKLTHTFTSAK 142

Query: 515 MKIMFQTVKNCCNNMLEAI---ASNTDLDKDLKEFLGRYTVDVVGSCAFGIECNSFKHPD 685
           MK MF TV N  + M+  +    S++    ++ + + R+T DV+G CAFG++CNS + P 
Sbjct: 143 MKSMFSTVLNVGDEMIRVVDEKISSSSQTLEVTDIVSRFTSDVIGICAFGLKCNSLRDPK 202

Query: 686 AEFRKMGLRAFSLXXXXXXXXXXXIAYLPKLSRXMG----LPSNNKXH*GSFFYXVVMET 853
           AEF +MG  A              I  +PKL+  +G    LPS  K     F+  +V +T
Sbjct: 203 AEFVQMGYSALR-ERRHGWLVDLLIFGMPKLAVKLGFQFLLPSVQK-----FYMKIVQDT 256

Query: 854 I 856
           I
Sbjct: 257 I 257